Microbial Eukaryotes: a Missing Link in Gut Microbiome Studies.
Identifieur interne : 000089 ( Main/Exploration ); précédent : 000088; suivant : 000090Microbial Eukaryotes: a Missing Link in Gut Microbiome Studies.
Auteurs : Isabelle Laforest-Lapointe [Canada] ; Marie-Claire Arrieta [Canada]Source :
- mSystems [ 2379-5077 ]
Abstract
Human-associated microbial communities include prokaryotic and eukaryotic organisms across high-level clades of the tree of life. While advances in high-throughput sequencing technology allow for the study of diverse lineages, the vast majority of studies are limited to bacteria, and very little is known on how eukaryote microbes fit in the overall microbial ecology of the human gut. As recent studies consider eukaryotes in their surveys, it is becoming increasingly clear that eukaryotes play important ecological roles in the microbiome as well as in host health. In this perspective, we discuss new evidence on eukaryotes as fundamental species of the human gut and emphasize that future microbiome studies should characterize the multitrophic interactions between microeukaryotes, other microorganisms, and the host.
DOI: 10.1128/mSystems.00201-17
PubMed: 29556538
PubMed Central: PMC5850078
Affiliations:
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type="state">Alberta</region></placeName></affiliation><affiliation wicri:level="4"><nlm:affiliation>Department of Pediatrics, University of Calgary, Calgary, Alberta, Canada.</nlm:affiliation><country xml:lang="fr">Canada</country><wicri:regionArea>Department of Pediatrics, University of Calgary, Calgary, Alberta</wicri:regionArea><orgName type="university">Université de Calgary</orgName><placeName><settlement type="city">Calgary</settlement><region type="state">Alberta</region></placeName></affiliation></author></analytic><series><title level="j">mSystems</title><idno type="ISSN">2379-5077</idno></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Human-associated microbial communities include prokaryotic and eukaryotic organisms across high-level clades of the tree of life. While advances in high-throughput sequencing technology allow for the study of diverse lineages, the vast majority of studies are limited to bacteria, and very little is known on how eukaryote microbes fit in the overall microbial ecology of the human gut. As recent studies consider eukaryotes in their surveys, it is becoming increasingly clear that eukaryotes play important ecological roles in the microbiome as well as in host health. In this perspective, we discuss new evidence on eukaryotes as fundamental species of the human gut and emphasize that future microbiome studies should characterize the multitrophic interactions between microeukaryotes, other microorganisms, and the host.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">29556538</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>01</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">2379-5077</ISSN><JournalIssue CitedMedium="Print"><Volume>3</Volume><Issue>2</Issue><PubDate><MedlineDate>2018 Mar-Apr</MedlineDate></PubDate></JournalIssue><Title>mSystems</Title><ISOAbbreviation>mSystems</ISOAbbreviation></Journal><ArticleTitle>Microbial Eukaryotes: a Missing Link in Gut Microbiome Studies.</ArticleTitle><ELocationID EIdType="pii" ValidYN="Y">e00201-17</ELocationID><ELocationID EIdType="doi" ValidYN="Y">10.1128/mSystems.00201-17</ELocationID><Abstract><AbstractText>Human-associated microbial communities include prokaryotic and eukaryotic organisms across high-level clades of the tree of life. While advances in high-throughput sequencing technology allow for the study of diverse lineages, the vast majority of studies are limited to bacteria, and very little is known on how eukaryote microbes fit in the overall microbial ecology of the human gut. As recent studies consider eukaryotes in their surveys, it is becoming increasingly clear that eukaryotes play important ecological roles in the microbiome as well as in host health. In this perspective, we discuss new evidence on eukaryotes as fundamental species of the human gut and emphasize that future microbiome studies should characterize the multitrophic interactions between microeukaryotes, other microorganisms, and the host.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Laforest-Lapointe</LastName><ForeName>Isabelle</ForeName><Initials>I</Initials><Identifier Source="ORCID">https://orcid.org/0000-0003-3630-9475</Identifier><AffiliationInfo><Affiliation>Department of Physiology and Pharmacology, University of Calgary, Calgary, Alberta, Canada.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Pediatrics, University of Calgary, Calgary, Alberta, Canada.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Arrieta</LastName><ForeName>Marie-Claire</ForeName><Initials>MC</Initials><AffiliationInfo><Affiliation>Department of Physiology and Pharmacology, University of Calgary, Calgary, Alberta, Canada.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Pediatrics, University of Calgary, Calgary, Alberta, Canada.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2018</Year><Month>03</Month><Day>13</Day></ArticleDate></Article><MedlineJournalInfo><Country>United States</Country><MedlineTA>mSystems</MedlineTA><NlmUniqueID>101680636</NlmUniqueID><ISSNLinking>2379-5077</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Blastocystis</Keyword><Keyword MajorTopicYN="N">bacteria</Keyword><Keyword MajorTopicYN="N">eukaryotes</Keyword><Keyword MajorTopicYN="N">fungi</Keyword><Keyword MajorTopicYN="N">gut microbiome</Keyword><Keyword MajorTopicYN="N">immune system</Keyword><Keyword MajorTopicYN="N">interkingdom interactions</Keyword><Keyword MajorTopicYN="N">microbial ecology</Keyword><Keyword MajorTopicYN="N">prokaryotes</Keyword><Keyword MajorTopicYN="N">protozoan</Keyword></KeywordList><CoiStatement>Conflict of Interest Disclosures: I.L.-L. has nothing to disclose. M.-C.A. has nothing to disclose. Conflict of Interest Disclosures: I.L.-L. has nothing to disclose. 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